Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | H9N25_10500 | Q92IF9 | Negative | 2555883 - 2557781 | 72440.6 |
| hypothetical protein | H9N25_10505 | Not Available | Negative | 2558252 - 2558539 | 10523.4 |
| hypothetical protein | H9N25_10510 | Not Available | Negative | 2558650 - 2559087 | 15960.3 |
| hypothetical protein | H9N25_10515 | Not Available | Negative | 2559217 - 2559852 | 24066.4 |
| glycosyltransferase family 2 protein | H9N25_10520 | Not Available | Negative | 2560057 - 2561154 | 42290.0 |
| peptidase domain-containing abc transporter | H9N25_10525 | P59852 | Positive | 2561245 - 2563464 | 84695.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | H9N25_10530 | P16534 | Positive | 2563488 - 2564795 | 49886.1 |
| udp-galactopyranose mutase | H9N25_10535 | P37747 | Positive | 2564800 - 2565963 | 45106.7 |
| duf922 domain-containing protein | H9N25_10540 | Not Available | Positive | 2565956 - 2566504 | 21408.8 |
| hypothetical protein | H9N25_10545 | Not Available | Positive | 2566605 - 2567384 | 27694.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

