Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_10300 | Not Available | Negative | 2519649 - 2519963 | 11873.4 |
| hypothetical protein | H9N25_10305 | Not Available | Positive | 2520180 - 2520443 | 9621.15 |
| rna-binding protein | H9N25_10310 | Not Available | Positive | 2520452 - 2520643 | 6958.32 |
| ai-2e family transporter | H9N25_10315 | O34472 | Negative | 2520834 - 2521958 | 41625.2 |
| doxx family membrane protein | H9N25_10320 | A5FGE0 | Positive | 2522172 - 2523529 | 49379.5 |
| site-specific integrase | H9N25_10325 | B7IFN3 | Positive | 2523820 - 2524929 | 43040.9 |
| hypothetical protein | H9N25_10330 | Not Available | Positive | 2524932 - 2525816 | 34627.2 |
| helix-turn-helix domain-containing protein | H9N25_10335 | Not Available | Positive | 2525939 - 2526229 | 11140.3 |
| hypothetical protein | H9N25_10340 | Not Available | Positive | 2526222 - 2526791 | 22107.1 |
| hypothetical protein | H9N25_10345 | Not Available | Positive | 2526795 - 2527751 | 36772.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

