Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | H9N25_10050 | Q55890 | Positive | 2451384 - 2451773 | 14718.1 |
| cysteine synthase cysm | H9N25_10055 | Q9I526 | Negative | 2451784 - 2452656 | 31594.0 |
| doxx family membrane protein | H9N25_10060 | Q59967 | Negative | 2452669 - 2453479 | 29874.1 |
| heparinase ii/iii family protein | H9N25_10065 | Not Available | Negative | 2453701 - 2455593 | 71266.5 |
| c-type cytochrome | H9N25_10070 | Not Available | Negative | 2455619 - 2458225 | 95438.3 |
| hypothetical protein | H9N25_10075 | Not Available | Positive | 2458688 - 2458858 | 6679.17 |
| acyl-coa desaturase | H9N25_10080 | Q08871 | Positive | 2459126 - 2460211 | 41507.8 |
| gdsl family lipase | H9N25_10085 | Not Available | Positive | 2460464 - 2461051 | 23045.6 |
| esterase family protein | H9N25_10090 | Not Available | Positive | 2461118 - 2461846 | 28375.6 |
| hypothetical protein | H9N25_10095 | Not Available | Negative | 2461857 - 2462390 | 20016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

