Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | H9N25_00855 | Q11QM8 | Negative | 193754 - 194767 | 36270.9 |
| endonuclease iii | H9N25_00860 | Q4UK93 | Negative | 194903 - 195568 | 25061.4 |
| duf3347 domain-containing protein | H9N25_00865 | Not Available | Positive | 197517 - 197993 | 17422.2 |
| multicopper oxidase domain-containing protein | H9N25_00870 | Q47452 | Positive | 198010 - 200301 | 87120.1 |
| hypothetical protein | H9N25_00875 | Not Available | Negative | 200303 - 201262 | 36957.9 |
| hypothetical protein | H9N25_00880 | Not Available | Positive | 201469 - 202116 | 24146.1 |
| hypothetical protein | H9N25_00885 | Not Available | Positive | 202124 - 202582 | 17020.9 |
| hypothetical protein | H9N25_00890 | Not Available | Positive | 202679 - 203257 | 21188.6 |
| mfs transporter | H9N25_00895 | P23910 | Negative | 203446 - 204630 | 41709.4 |
| hypothetical protein | H9N25_00900 | Not Available | Negative | 205602 - 205796 | 7321.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

