Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_07855 | Not Available | Positive | 1925612 - 1925911 | 11685.5 |
| zinc-binding alcohol dehydrogenase family protein | H9N25_07860 | Q5HM44 | Negative | 1926042 - 1927055 | 37115.6 |
| tonb-dependent receptor | H9N25_07865 | Not Available | Negative | 1927175 - 1929559 | 90020.0 |
| hamp domain-containing histidine kinase | H9N25_07870 | Q08408 | Positive | 1929669 - 1931123 | 55655.2 |
| response regulator transcription factor | H9N25_07875 | Q9AE24 | Positive | 1931110 - 1931802 | 26268.0 |
| pentapeptide repeat-containing protein | H9N25_07880 | P69202 | Positive | 1932073 - 1932987 | 32812.1 |
| aads family aminoglycoside 6-adenylyltransferase | H9N25_07885 | P17585 | Positive | 1933202 - 1934071 | 33771.5 |
| guanylyltransferase | H9N25_07890 | Q9V3N8 | Negative | 1934143 - 1934934 | 31114.2 |
| aaa family atpase | H9N25_07895 | Q96T60 | Negative | 1934924 - 1935370 | 17224.6 |
| hypothetical protein | H9N25_07900 | Not Available | Negative | 1935549 - 1936520 | 36652.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

