Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | H9N25_00705 | Not Available | Positive | 157144 - 157530 | 13961.8 |
| pirin family protein | H9N25_00710 | Q9D711 | Positive | 157527 - 158414 | 32768.2 |
| nuclear transport factor 2 family protein | H9N25_00715 | Not Available | Positive | 158667 - 158990 | 11620.5 |
| hypothetical protein | H9N25_00720 | Not Available | Positive | 159104 - 160099 | 37314.2 |
| gfo/idh/moca family oxidoreductase | H9N25_00725 | P04387 | Positive | 160128 - 161255 | 40557.5 |
| atp-binding protein | H9N25_00730 | P55530 | Positive | 161938 - 162936 | 37556.4 |
| s8 family serine peptidase | H9N25_00735 | P55381 | Positive | 162942 - 165461 | 93524.7 |
| hypothetical protein | H9N25_00740 | Not Available | Negative | 166504 - 167466 | 36409.3 |
| hypothetical protein | H9N25_00745 | Not Available | Positive | 167861 - 168049 | 7497.88 |
| hypothetical protein | H9N25_00750 | Not Available | Negative | 168470 - 169099 | 23068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

