Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | H9N25_00655 | Not Available | - | 145079 - 146680 | 58177.8 |
| susc/raga family tonb-linked outer membrane protein | H9N25_00660 | T2KPJ3 | - | 146691 - 149738 | 111091.0 |
| hypothetical protein | H9N25_00665 | Not Available | + | 150642 - 151466 | 30963.1 |
| helix-turn-helix transcriptional regulator | H9N25_00670 | P26993 | - | 151881 - 152684 | 31128.4 |
| nucleoside-diphosphate sugar epimerase | H9N25_00675 | A1YER2 | - | 152691 - 153338 | 23858.4 |
| aldehyde reductase | H9N25_00680 | G7IYC1 | - | 153335 - 154387 | 38482.8 |
| leucine-rich repeat domain-containing protein | H9N25_00685 | Not Available | - | 154924 - 155685 | 28355.4 |
| hypothetical protein | H9N25_00690 | Not Available | - | 155698 - 156294 | 22849.7 |
| doxx family membrane protein | H9N25_00695 | Not Available | + | 156395 - 156672 | 10015.3 |
| helix-turn-helix transcriptional regulator | H9N25_00700 | P96673 | - | 156700 - 157047 | 12950.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.