Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_00605 | Not Available | + | 128486 - 129034 | 20213.5 |
| dyp-type peroxidase | H9N25_00610 | B0BK71 | + | 129139 - 130488 | 50383.5 |
| response regulator | H9N25_00615 | T2KMF4 | - | 130676 - 131560 | 33021.9 |
| hybrid sensor histidine kinase/response regulator | H9N25_00620 | T2KMF4 | - | 131542 - 134739 | 120641.0 |
| glycoside hydrolase family 88 protein | H9N25_00625 | T2KLZ3 | + | 135056 - 136324 | 47656.6 |
| tonb-dependent receptor | H9N25_00630 | T2KPJ3 | + | 136452 - 139601 | 115855.0 |
| ragb/susd family nutrient uptake outer membrane protein | H9N25_00635 | T2KNB8 | + | 139621 - 141312 | 61908.4 |
| hypothetical protein | H9N25_00640 | Not Available | + | 141381 - 142106 | 26417.8 |
| duf4955 domain-containing protein | H9N25_00645 | Not Available | + | 142070 - 142969 | 32860.1 |
| sulfatase | H9N25_00650 | Q8A2F6 | + | 143110 - 144519 | 53630.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.