Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase family protein | H9N25_05705 | P37508 | Negative | 1382113 - 1382673 | 21595.1 |
| hypothetical protein | H9N25_05710 | Not Available | Negative | 1382789 - 1383319 | 19123.3 |
| ester cyclase | H9N25_05715 | Not Available | Negative | 1383361 - 1383789 | 16109.2 |
| helix-turn-helix transcriptional regulator | H9N25_05720 | O32071 | Negative | 1384008 - 1384697 | 25880.7 |
| hypothetical protein | H9N25_05725 | Not Available | Positive | 1384896 - 1385294 | 15038.6 |
| doxx family membrane protein | H9N25_05730 | P31474 | Positive | 1385694 - 1387093 | 49156.3 |
| hypothetical protein | H9N25_05735 | Not Available | Positive | 1387219 - 1387530 | 12417.0 |
| alpha/beta hydrolase | H9N25_05740 | O52866 | Negative | 1387523 - 1388404 | 33036.5 |
| lrp/asnc family transcriptional regulator | H9N25_05745 | Q8U0P3 | Positive | 1388513 - 1388962 | 16538.3 |
| hypothetical protein | H9N25_05750 | Not Available | Positive | 1388925 - 1389227 | 11588.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

