Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_05405 | Not Available | Positive | 1291081 - 1292376 | 49430.3 |
| nad(p)h-dependent oxidoreductase | H9N25_05410 | P54439 | Negative | 1293430 - 1293960 | 20996.2 |
| helix-turn-helix transcriptional regulator | H9N25_05415 | P37486 | Positive | 1294060 - 1294425 | 13918.1 |
| na+/h+ antiporter nhaa | H9N25_05420 | A5FBK7 | Negative | 1295113 - 1296279 | 41949.8 |
| porp/sprf family type ix secretion system membrane protein | H9N25_05425 | Not Available | Negative | 1298393 - 1299313 | 34126.5 |
| gliding motility-associated c-terminal domain-containing protein | H9N25_05430 | Not Available | Negative | 1299322 - 1301031 | 58289.7 |
| ceha/mcba family metallohydrolase | H9N25_05435 | Not Available | Negative | 1301166 - 1305116 | 136934.0 |
| threonylcarbamoyl-amp synthase | H9N25_05440 | P0AFR5 | Negative | 1306206 - 1306826 | 23086.7 |
| fmn-binding glutamate synthase family protein | H9N25_05445 | O34849 | Positive | 1306910 - 1308571 | 60572.8 |
| btrh n-terminal domain-containing protein | H9N25_05450 | Not Available | Positive | 1309034 - 1310020 | 37307.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

