Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_05255 | Not Available | Negative | 1257251 - 1257745 | 19036.9 |
| hypothetical protein | H9N25_05260 | Not Available | Negative | 1257770 - 1258273 | 18969.5 |
| tigr00730 family rossman fold protein | H9N25_05265 | O05306 | Negative | 1258434 - 1259141 | 26875.3 |
| sodium:solute symporter | H9N25_05270 | Q5E733 | Negative | 1259159 - 1260667 | 55578.0 |
| recombination protein recr | H9N25_05275 | Q11W94 | Positive | 1260896 - 1261513 | 22804.7 |
| sdr family oxidoreductase | H9N25_05280 | Q99J47 | Positive | 1261605 - 1262423 | 29471.2 |
| ion transporter | H9N25_05285 | D9N164 | Negative | 1263269 - 1264210 | 36033.6 |
| anthranilate phosphoribosyltransferase | H9N25_05290 | A0M4T1 | Positive | 1264523 - 1265512 | 36070.4 |
| phosphoribosylanthranilate isomerase | H9N25_05295 | A6L9J9 | Positive | 1265530 - 1266138 | 22884.3 |
| tryptophan synthase subunit beta | H9N25_05300 | A6L9K4 | Positive | 1266292 - 1267473 | 43173.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

