Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | H9N25_05055 | P16681 | Positive | 1211067 - 1211489 | 15154.0 |
| doxx family membrane protein | H9N25_05060 | Not Available | Positive | 1211641 - 1212021 | 13960.2 |
| duf2147 domain-containing protein | H9N25_05065 | Not Available | Positive | 1212122 - 1212553 | 16201.7 |
| doxx family membrane protein | H9N25_05070 | Not Available | Positive | 1212562 - 1213580 | 37258.2 |
| duf475 domain-containing protein | H9N25_05075 | O34447 | Positive | 1213733 - 1214548 | 30532.9 |
| hypothetical protein | H9N25_05080 | Not Available | Positive | 1214520 - 1214759 | 9310.32 |
| dienelactone hydrolase family protein | H9N25_05085 | Q7DFU6 | Negative | 1215312 - 1216175 | 31423.8 |
| phosphotransferase | H9N25_05090 | P73341 | Negative | 1216238 - 1217239 | 39662.0 |
| tlpa family protein disulfide reductase | H9N25_05095 | Not Available | Negative | 1217239 - 1217991 | 28253.2 |
| 2og-fe(ii) oxygenase | H9N25_05100 | Q86KR9 | Positive | 1218098 - 1218691 | 22910.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

