Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | H9N25_00005 | A6GYW8 | + | 1 - 1431 | 53909.2 |
| nudix hydrolase | H9N25_00010 | P54570 | - | 1562 - 2110 | 20891.0 |
| hypothetical protein | H9N25_00015 | Not Available | - | 2160 - 2549 | 15062.3 |
| tpm domain-containing protein | H9N25_00020 | P55140 | - | 2626 - 3399 | 26580.7 |
| tpm domain-containing protein | H9N25_00025 | Not Available | - | 3403 - 3846 | 16147.3 |
| lema family protein | H9N25_00030 | A8AVK0 | - | 3930 - 4511 | 21200.3 |
| nad(p)/fad-dependent oxidoreductase | H9N25_00035 | Q05627 | + | 5058 - 6599 | 56269.7 |
| dinb family protein | H9N25_00040 | Not Available | + | 6633 - 7100 | 17124.2 |
| coa-binding protein | H9N25_00045 | Not Available | + | 7127 - 7486 | 13402.2 |
| acyloxyacyl hydrolase | H9N25_00050 | Not Available | - | 7483 - 8592 | 41332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.