Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | HMY34_00210 | B8EMF2 | Positive | 42830 - 45175 | 85640.4 |
| hypothetical protein | HMY34_00215 | A8FKF9 | Positive | 45186 - 45860 | 22968.0 |
| glutathionylspermidine synthase family protein | HMY34_00220 | P33222 | Positive | 45864 - 47042 | 44773.5 |
| lmo0937 family membrane protein | HMY34_00225 | Not Available | Positive | 47289 - 47435 | 5396.22 |
| hypothetical protein | HMY34_00230 | Not Available | Positive | 47477 - 47794 | 11665.7 |
| hypothetical protein | HMY34_00235 | Not Available | Positive | 47799 - 48080 | 10136.8 |
| hypothetical protein | HMY34_00240 | Not Available | Positive | 48047 - 48265 | 7842.73 |
| ai-2e family transporter | HMY34_00245 | Not Available | Positive | 48281 - 48985 | 26095.2 |
| cyclic beta 1-2 glucan synthetase | HMY34_00250 | P20471 | Positive | 48982 - 57528 | 318283.0 |
| hypothetical protein | HMY34_00255 | Not Available | Positive | 57678 - 57968 | 10786.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
