Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | HMY34_19815 | Q72H90 | Negative | 3523 - 4164 | 22469.9 |
| type ii toxin-antitoxin system rele/pare family toxin | HMY34_19820 | Q9A4F4 | Negative | 4255 - 4557 | 11354.9 |
| ribbon-helix-helix protein, copg family | HMY34_19825 | Not Available | Negative | 4545 - 4817 | 10848.7 |
| hypothetical protein | HMY34_19830 | Not Available | Negative | 4943 - 5248 | 11801.0 |
| hypothetical protein | HMY34_19835 | Not Available | Negative | 5465 - 5875 | 15697.8 |
| hypothetical protein | HMY34_19840 | Not Available | Negative | 5921 - 6208 | 10908.3 |
| hypothetical protein | HMY34_19845 | Not Available | Negative | 6461 - 6982 | 18413.6 |
| hypothetical protein | HMY34_19850 | Not Available | Negative | 7418 - 7672 | 9555.3 |
| recombinase family protein | HMY34_19855 | P07945 | Negative | 7669 - 8316 | 24447.5 |
| hypothetical protein | HMY34_19860 | Not Available | Positive | 9039 - 9383 | 12725.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
