Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | HMY34_01560 | Q52556 | Negative | 327206 - 328177 | 35115.7 |
| glucose-1-phosphate thymidylyltransferase rfba | HMY34_01565 | P37779 | Positive | 328306 - 329190 | 32770.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMY34_01570 | Q9HU21 | Positive | 329187 - 329735 | 20479.1 |
| dtdp-4-dehydrorhamnose reductase | HMY34_01575 | O66251 | Positive | 329732 - 330607 | 31640.7 |
| dtdp-glucose 4,6-dehydratase | HMY34_01580 | B0RVL0 | Positive | 330604 - 331671 | 39883.6 |
| class i sam-dependent methyltransferase | HMY34_01585 | Q2L2T5 | Positive | 331671 - 332627 | 36531.3 |
| oligosaccharide biosynthesis protein alg14 | HMY34_01590 | Q6BMD0 | Positive | 332624 - 333097 | 17268.1 |
| glycosyl transferase family 28 | HMY34_01595 | Q9NP73 | Positive | 333094 - 333591 | 18530.1 |
| oligosaccharide flippase family protein | HMY34_01600 | Not Available | Positive | 333588 - 334871 | 47543.4 |
| hypothetical protein | HMY34_01605 | Not Available | Positive | 334880 - 336190 | 50309.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
