Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | HMY34_01310 | Q8CXF3 | Positive | 283478 - 283990 | 18339.8 |
| cell division topological specificity factor mine | HMY34_01315 | Q3JDR7 | Negative | 284035 - 284295 | 10133.2 |
| septum site-determining protein mind | HMY34_01320 | P0AEZ5 | Negative | 284299 - 285105 | 29249.2 |
| septum site-determining protein minc | HMY34_01325 | A1U342 | Negative | 285213 - 285908 | 24932.3 |
| sel1-like repeat protein | HMY34_01330 | Not Available | Positive | 286174 - 287430 | 45581.2 |
| transcription-repair coupling factor | HMY34_01335 | P45128 | Positive | 287465 - 290968 | 131103.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | HMY34_01340 | P40193 | Negative | 290970 - 292268 | 46544.7 |
| glutamine amidotransferase | HMY34_01345 | P40194 | Positive | 292297 - 293001 | 26037.7 |
| mosc domain-containing protein | HMY34_01350 | P32157 | Positive | 292998 - 293696 | 26171.5 |
| hypothetical protein | HMY34_01355 | Not Available | Positive | 293714 - 293938 | 8665.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
