Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argonaute paz domain-containing protein | HMY34_13260 | Not Available | Negative | 2678041 - 2680293 | 85029.0 |
| 4'-phosphopantetheinyl transferase | HMY34_13265 | P05719 | Negative | 2680321 - 2681682 | 50401.2 |
| duf1016 domain-containing protein | HMY34_13270 | P45423 | Negative | 2681679 - 2682719 | 39622.2 |
| n-6 dna methylase | HMY34_13275 | P40813 | Negative | 2682716 - 2684185 | 54371.8 |
| type i restriction-modification system endonuclease | HMY34_13280 | P08956 | Negative | 2684207 - 2686981 | 105857.0 |
| nitrogen fixation protein nifx | HMY34_13285 | P14887 | Positive | 2687224 - 2687709 | 17456.8 |
| soxr reducing system rsec family protein | HMY34_13290 | P44060 | Positive | 2687706 - 2688203 | 17619.5 |
| nifx-associated nitrogen fixation protein | HMY34_13295 | P55676 | Positive | 2688200 - 2688673 | 17451.5 |
| hypothetical protein | HMY34_13300 | Not Available | Positive | 2688683 - 2688895 | 7490.84 |
| ferredoxin iii, nif-specific | HMY34_13305 | P58567 | Positive | 2688907 - 2689218 | 11382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
