Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | HMY34_12660 | Not Available | Positive | 2569930 - 2571081 | 43852.8 |
| duf4276 family protein | HMY34_12665 | Not Available | Positive | 2571075 - 2571692 | 23122.8 |
| dead/deah box helicase family protein | HMY34_12670 | Not Available | Positive | 2571689 - 2574940 | 125501.0 |
| threonylcarbamoyl-amp synthase | HMY34_12675 | Q3J7C4 | Negative | 2574937 - 2575479 | 19460.8 |
| hypothetical protein | HMY34_12680 | Not Available | Negative | 2575525 - 2575761 | 8816.78 |
| lysr family transcriptional regulator | HMY34_12685 | Q9F1R2 | Positive | 2575883 - 2576869 | 37116.3 |
| hypothetical protein | HMY34_12690 | D0KZ73 | Positive | 2576862 - 2577491 | 22802.5 |
| hypothetical protein | HMY34_12695 | Not Available | Positive | 2577516 - 2577815 | 11244.2 |
| hypothetical protein | HMY34_12700 | Not Available | Positive | 2577817 - 2578968 | 44174.3 |
| na+/h+ antiporter subunit e | HMY34_12705 | Not Available | Positive | 2579132 - 2579620 | 18338.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
