Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like serine protease | HMY34_12510 | Q9SHZ0 | Negative | 2539916 - 2541394 | 55114.1 |
| sseb family protein | HMY34_12515 | Not Available | Positive | 2541574 - 2541969 | 14464.5 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | HMY34_12520 | Q8XCG6 | Negative | 2541961 - 2542752 | 29278.7 |
| dna (cytosine-5-)-methyltransferase | HMY34_12525 | O34680 | Positive | 2542823 - 2543767 | 34114.5 |
| restriction endonuclease | HMY34_12530 | Not Available | Negative | 2543720 - 2544640 | 34434.3 |
| adp compounds hydrolase nude | HMY34_12535 | P45799 | Negative | 2544682 - 2545233 | 20719.6 |
| hypothetical protein | HMY34_12540 | Q58949 | Negative | 2545248 - 2547248 | 72980.4 |
| gmp/imp nucleotidase | HMY34_12545 | P64636 | Positive | 2547298 - 2547966 | 25707.5 |
| hypothetical protein | HMY34_12550 | Not Available | Negative | 2547945 - 2548085 | 4751.83 |
| transposase | HMY34_12555 | P76102 | Negative | 2548186 - 2549421 | 46499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
