Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | HMY34_12410 | Q9WZY4 | Negative | 2525619 - 2526890 | 45384.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | HMY34_12415 | B8GUQ6 | Positive | 2526961 - 2527773 | 30234.5 |
| hypothetical protein | HMY34_12420 | Not Available | Negative | 2527807 - 2528001 | 7317.28 |
| trna dihydrouridine(20/20a) synthase dusa | HMY34_12425 | Q8EAJ0 | Positive | 2528092 - 2529060 | 35990.2 |
| Trna-asn | Not Available | Not Available | Positive | 2529106 - 2529181 | Not Available |
| hypothetical protein | HMY34_12435 | Not Available | Negative | 2529269 - 2529625 | 12996.9 |
| p-ii family nitrogen regulator | HMY34_12440 | O28524 | Negative | 2529637 - 2530014 | 13717.8 |
| duf1538 domain-containing protein | HMY34_12445 | A0A1X9QDU4 | Negative | 2530011 - 2531786 | 62715.4 |
| acyl-coa thioester hydrolase ycia | HMY34_12450 | P0A1A2 | Positive | 2532001 - 2532393 | 14330.5 |
| m48 family metallopeptidase | HMY34_12455 | Not Available | Negative | 2532397 - 2533131 | 27918.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
