Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_12360 | Not Available | Negative | 2515667 - 2516041 | 14046.0 |
| ammonium transporter | HMY34_12365 | Q58739 | Negative | 2516082 - 2517275 | 41742.6 |
| hypothetical protein | HMY34_12370 | Not Available | Positive | 2517582 - 2518031 | 16636.7 |
| duf302 domain-containing protein | HMY34_12375 | Not Available | Negative | 2518114 - 2518737 | 22811.8 |
| scp-2 sterol transfer family protein | HMY34_12380 | Not Available | Negative | 2518823 - 2519227 | 14812.9 |
| efflux rnd transporter periplasmic adaptor subunit | HMY34_12385 | P25196 | Positive | 2519361 - 2520398 | 36855.1 |
| efflux rnd transporter permease subunit | HMY34_12390 | P25197 | Positive | 2520398 - 2523538 | 114568.0 |
| hypothetical protein | HMY34_12395 | Not Available | Positive | 2523605 - 2524468 | 32783.6 |
| hypothetical protein | HMY34_12400 | Not Available | Negative | 2524559 - 2525014 | 16368.0 |
| thiol peroxidase | HMY34_12405 | Q8KED5 | Negative | 2525088 - 2525582 | 17008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
