Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_12160 | Not Available | Positive | 2472962 - 2473483 | 18967.3 |
| duf4405 domain-containing protein | HMY34_12165 | P23000 | Positive | 2473495 - 2474106 | 22203.6 |
| duf2202 domain-containing protein | HMY34_12170 | Q58164 | Positive | 2474191 - 2474952 | 26808.4 |
| duf2202 domain-containing protein | HMY34_12175 | Q58164 | Positive | 2475000 - 2475680 | 24729.5 |
| duf302 domain-containing protein | HMY34_12180 | Not Available | Negative | 2475727 - 2476239 | 17693.3 |
| duf302 domain-containing protein | HMY34_12185 | Not Available | Negative | 2476251 - 2476763 | 17937.0 |
| hypothetical protein | HMY34_12190 | Not Available | Positive | 2477100 - 2478647 | 54859.2 |
| hypothetical protein | HMY34_12195 | Not Available | Negative | 2478652 - 2479059 | 14724.6 |
| efflux rnd transporter permease subunit | HMY34_12200 | P94177 | Negative | 2479077 - 2482172 | 111832.0 |
| efflux rnd transporter periplasmic adaptor subunit | HMY34_12205 | P37973 | Negative | 2482176 - 2483255 | 37664.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
