Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine--lipid a transferase | HMY34_12110 | P30845 | Negative | 2464767 - 2466377 | 59685.6 |
| cytochrome b | HMY34_12115 | P76345 | Positive | 2466631 - 2467173 | 20109.2 |
| hypothetical protein | HMY34_12120 | Not Available | Positive | 2467284 - 2468123 | 30634.7 |
| hypothetical protein | HMY34_12125 | Not Available | Positive | 2468113 - 2469087 | 34116.4 |
| cytochrome c class i | HMY34_12130 | P20958 | Positive | 2469181 - 2469624 | 14775.2 |
| fad-dependent oxidoreductase | HMY34_12135 | Q06530 | Positive | 2469624 - 2470877 | 44370.7 |
| helix-turn-helix transcriptional regulator | HMY34_12140 | Not Available | Positive | 2470993 - 2471505 | 19740.7 |
| hypothetical protein | HMY34_12145 | Not Available | Negative | 2471526 - 2471834 | 11586.8 |
| helix-turn-helix transcriptional regulator | HMY34_12150 | Not Available | Negative | 2471845 - 2472369 | 20150.3 |
| duf1924 domain-containing protein | HMY34_12155 | P81238 | Positive | 2472535 - 2472951 | 15497.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
