Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsba/dsbl | HMY34_11960 | Q44504 | Negative | 2435060 - 2435713 | 24528.7 |
| c-type cytochrome biogenesis protein ccsb | HMY34_11965 | P22554 | Negative | 2435801 - 2436979 | 44227.2 |
| cytochrome c biogenesis protein resb | HMY34_11970 | Q8DL16 | Negative | 2436954 - 2438963 | 75378.1 |
| cytochrome c4 | HMY34_11975 | P86052 | Negative | 2439064 - 2439675 | 21100.1 |
| yiha family ribosome biogenesis gtp-binding protein | HMY34_11980 | B8GTD2 | Positive | 2439984 - 2440583 | 22534.3 |
| do family serine endopeptidase | HMY34_11985 | P39099 | Negative | 2440906 - 2442072 | 40990.6 |
| dnaj domain-containing protein | HMY34_11990 | A9KE65 | Negative | 2442139 - 2443050 | 33758.8 |
| yicc family protein | HMY34_11995 | P23839 | Negative | 2443135 - 2444001 | 33450.9 |
| comf family protein | HMY34_12000 | P31773 | Negative | 2444035 - 2444727 | 25742.3 |
| rhombosortase | HMY34_12005 | Not Available | Negative | 2444724 - 2445323 | 22498.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
