Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | HMY34_11760 | Q6EPN8 | Negative | 2393107 - 2394348 | 46118.8 |
| oligoribonuclease | HMY34_11765 | A4VR15 | Positive | 2394397 - 2394942 | 20472.4 |
| transposase | HMY34_11770 | P54992 | Negative | 2395248 - 2396480 | 45534.8 |
| atp-binding protein | HMY34_11775 | P9WLM8 | Negative | 2396739 - 2397920 | 44314.9 |
| hypothetical protein | HMY34_11780 | Not Available | Negative | 2398019 - 2398234 | 8676.67 |
| hypothetical protein | HMY34_11785 | Not Available | Positive | 2398450 - 2398728 | 10454.7 |
| hypothetical protein | HMY34_11790 | Not Available | Positive | 2399123 - 2399413 | 11000.7 |
| moxr family atpase | HMY34_11795 | P94474 | Positive | 2399479 - 2400414 | 33764.3 |
| duf58 domain-containing protein | HMY34_11800 | Not Available | Positive | 2400407 - 2401369 | 36018.7 |
| glucose-6-phosphate dehydrogenase | HMY34_11805 | Q9HZX3 | Positive | 2401362 - 2403370 | 74971.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
