Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | HMY34_10710 | Q0VTI9 | Positive | 2179990 - 2181129 | 40369.3 |
| hypothetical protein | HMY34_10715 | Q9I2S3 | Positive | 2181143 - 2182963 | 67626.8 |
| response regulator | HMY34_10720 | O25153 | Positive | 2183011 - 2186235 | 118489.0 |
| chemotaxis protein chew | HMY34_10725 | Not Available | Positive | 2186232 - 2186729 | 17914.8 |
| hypothetical protein | HMY34_10730 | Not Available | Negative | 2186721 - 2187209 | 18377.5 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | HMY34_10735 | B8GMY8 | Negative | 2187202 - 2188038 | 31156.1 |
| permease | HMY34_10740 | Q03268 | Negative | 2188129 - 2188845 | 25769.0 |
| spor domain-containing protein | HMY34_10745 | Not Available | Negative | 2188894 - 2189067 | 6391.93 |
| hypothetical protein | HMY34_10750 | Not Available | Negative | 2189052 - 2189585 | 18112.6 |
| m1 family peptidase | HMY34_10755 | P37898 | Negative | 2189700 - 2191691 | 74039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
