Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | HMY34_10510 | P0ADX3 | Positive | 2138837 - 2139256 | 15257.7 |
| adenosylmethionine decarboxylase | HMY34_10515 | A1WYT0 | Positive | 2139372 - 2140190 | 31386.2 |
| c40 family peptidase | HMY34_10520 | P96645 | Positive | 2140486 - 2141076 | 20959.9 |
| duf3530 family protein | HMY34_10525 | Not Available | Negative | 2141135 - 2142361 | 42710.6 |
| rubrerythrin | HMY34_10530 | Q9AGG3 | Positive | 2142502 - 2142921 | 15197.4 |
| fe-s oxidoreductase | HMY34_10535 | P43801 | Positive | 2143052 - 2144395 | 50417.1 |
| duf3501 family protein | HMY34_10540 | Not Available | Positive | 2144407 - 2144988 | 22086.3 |
| response regulator | HMY34_10545 | P58363 | Negative | 2144992 - 2146653 | 61104.8 |
| helix-turn-helix domain-containing protein | HMY34_10550 | Not Available | Positive | 2146770 - 2147213 | 16914.6 |
| hypothetical protein | HMY34_10555 | Not Available | Negative | 2147780 - 2148541 | 28205.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
