Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic pyranopterin monophosphate synthase moac | HMY34_10460 | B8GPA2 | Negative | 2131342 - 2131824 | 17454.5 |
| s41 family peptidase | HMY34_10465 | Q44879 | Negative | 2131839 - 2133275 | 52064.2 |
| peptidoglycan dd-metalloendopeptidase family protein | HMY34_10470 | P44864 | Negative | 2133463 - 2134704 | 45932.5 |
| winged helix-turn-helix transcriptional regulator | HMY34_10475 | Q9PFB1 | Positive | 2134850 - 2135194 | 12766.5 |
| rhodanese-like domain-containing protein | HMY34_10480 | P0AG29 | Positive | 2135339 - 2135719 | 13765.9 |
| glutaredoxin 3 | HMY34_10485 | Q9HU55 | Positive | 2135716 - 2135979 | 9932.12 |
| protein-export chaperone secb | HMY34_10490 | Q12HV7 | Positive | 2136000 - 2136455 | 17032.2 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | HMY34_10495 | B8GR94 | Positive | 2136452 - 2137459 | 35462.0 |
| glutathione synthase | HMY34_10500 | Q9I697 | Positive | 2137532 - 2138455 | 34146.6 |
| ydch family protein | HMY34_10505 | P0ACW6 | Negative | 2138466 - 2138711 | 9896.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
