Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | HMY34_10410 | P34882 | Positive | 2120573 - 2121643 | 39672.7 |
| ribonucleotide-diphosphate reductase subunit beta | HMY34_10415 | Q9Z6S4 | Positive | 2121781 - 2122959 | 45194.3 |
| hypothetical protein | HMY34_10420 | Not Available | Negative | 2123092 - 2123547 | 14720.7 |
| methylthioribulose 1-phosphate dehydratase | HMY34_10425 | Q4ZVC0 | Positive | 2123716 - 2124327 | 22559.9 |
| cupin | HMY34_10430 | Q0VPK4 | Positive | 2124332 - 2124874 | 20395.8 |
| acireductone synthase | HMY34_10435 | Q60AP9 | Positive | 2124874 - 2125566 | 25589.5 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | HMY34_10440 | B8GRB6 | Positive | 2125632 - 2127011 | 48766.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | HMY34_10445 | Q88BX8 | Positive | 2127011 - 2128849 | 67214.5 |
| sulp family inorganic anion transporter | HMY34_10450 | Q9FY46 | Positive | 2129010 - 2130773 | 63429.3 |
| hypothetical protein | HMY34_10455 | Not Available | Negative | 2130827 - 2131105 | 9908.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
