Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_10360 | Not Available | Negative | 2110025 - 2110336 | 11421.3 |
| transcriptional repressor lexa | HMY34_10365 | Q1IU64 | Negative | 2110360 - 2110971 | 22685.4 |
| arac family transcriptional regulator | HMY34_10370 | P35319 | Negative | 2111123 - 2112133 | 36954.5 |
| hypothetical protein | HMY34_10375 | Not Available | Negative | 2112137 - 2112355 | 7691.28 |
| duf2063 domain-containing protein | HMY34_10380 | P44267 | Negative | 2112457 - 2113206 | 28204.6 |
| duf692 domain-containing protein | HMY34_10385 | Q2Y5Y2 | Negative | 2113203 - 2114030 | 31447.6 |
| hypothetical protein | HMY34_10390 | Not Available | Negative | 2114034 - 2114531 | 17198.2 |
| ribonucleoside-diphosphate reductase subunit alpha | HMY34_10395 | O84834 | Positive | 2114765 - 2118730 | 147142.0 |
| eco29ki family restriction endonuclease | HMY34_10400 | Not Available | Positive | 2118736 - 2119383 | 24085.5 |
| dna (cytosine-5-)-methyltransferase | HMY34_10405 | O33481 | Positive | 2119380 - 2120567 | 44404.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
