Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_10310 | Not Available | Negative | 2100855 - 2101514 | 25155.1 |
| transposase family protein | HMY34_10315 | Not Available | Positive | 2101621 - 2102121 | 19117.9 |
| hypothetical protein | HMY34_10320 | Q00462 | Positive | 2102090 - 2102527 | 16675.0 |
| smek domain-containing protein | HMY34_10325 | Not Available | Negative | 2102541 - 2102951 | 16041.3 |
| atp-binding protein | HMY34_10330 | P9WLM8 | Negative | 2103059 - 2104297 | 45974.1 |
| trna (cytidine(34)-2'-o)-methyltransferase | HMY34_10335 | C6X9I5 | Positive | 2104387 - 2104851 | 17263.9 |
| bifunctional riboflavin kinase/fad synthetase | HMY34_10340 | P0AG42 | Positive | 2104861 - 2105778 | 34176.7 |
| adenosine kinase | HMY34_10345 | Q55480 | Negative | 2105775 - 2106770 | 35173.0 |
| hypothetical protein | HMY34_10350 | Q9HZA6 | Negative | 2107185 - 2108345 | 41963.9 |
| hypothetical protein | HMY34_10355 | Not Available | Negative | 2108462 - 2109913 | 52892.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
