Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | HMY34_10260 | Not Available | Positive | 2091109 - 2091981 | 31913.9 |
| yqge/algh family protein | HMY34_10265 | B2FRV1 | Positive | 2092004 - 2092570 | 20746.6 |
| holliday junction resolvase ruvx | HMY34_10270 | Q31EK3 | Positive | 2092567 - 2093013 | 16810.2 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | HMY34_10275 | A6UYL3 | Positive | 2092994 - 2093500 | 19036.9 |
| histidine phosphatase family protein | HMY34_10280 | P9WLH5 | Positive | 2093508 - 2094140 | 23712.3 |
| hypothetical protein | HMY34_10285 | Not Available | Negative | 2094147 - 2094626 | 17184.7 |
| sigma-70 family rna polymerase sigma factor | HMY34_10290 | A0PNM4 | Negative | 2094623 - 2095204 | 20944.8 |
| hypothetical protein | HMY34_10295 | Not Available | Negative | 2095351 - 2097228 | 64801.4 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | HMY34_10300 | Q58015 | Positive | 2097414 - 2099312 | 72010.6 |
| hypothetical protein | HMY34_10305 | Not Available | Negative | 2099371 - 2100843 | 57897.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
