Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_10210 | Not Available | Negative | 2081089 - 2081868 | 27582.2 |
| hypothetical protein | HMY34_10215 | Not Available | Positive | 2081975 - 2082322 | 12026.8 |
| heavy metal transporter | HMY34_10220 | Not Available | Positive | 2082395 - 2082682 | 10314.4 |
| hypothetical protein | HMY34_10225 | Not Available | Positive | 2082687 - 2083046 | 12725.7 |
| hypothetical protein | HMY34_10230 | Not Available | Positive | 2083156 - 2084769 | 60412.1 |
| atp-binding protein | HMY34_10235 | Q8YTC2 | Positive | 2084877 - 2086559 | 63404.6 |
| transglutaminase family protein | HMY34_10240 | Q49757 | Positive | 2086637 - 2087479 | 30376.0 |
| atp-binding cassette domain-containing protein | HMY34_10245 | Q57242 | Positive | 2087578 - 2089380 | 67920.3 |
| methyltransferase domain-containing protein | HMY34_10250 | Q8XDG3 | Positive | 2089615 - 2090397 | 29211.3 |
| sco family protein | HMY34_10255 | A6H784 | Negative | 2090378 - 2090974 | 21388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
