Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | HMY34_10160 | Not Available | Negative | 2067624 - 2068604 | 36447.9 |
| o-antigen ligase family protein | HMY34_10165 | Not Available | Positive | 2068880 - 2070112 | 45949.3 |
| polysaccharide biosynthesis tyrosine autokinase | HMY34_10170 | Q48452 | Negative | 2070134 - 2073532 | 126610.0 |
| oligosaccharide flippase family protein | HMY34_10175 | Not Available | Negative | 2073579 - 2074553 | 36329.9 |
| oligosaccharide flippase family protein | HMY34_10180 | P37781 | Negative | 2074550 - 2075071 | 19163.1 |
| glycosyltransferase family 4 protein | HMY34_10185 | Q58459 | Negative | 2075071 - 2076192 | 42483.7 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | HMY34_10190 | Q6F152 | Positive | 2076349 - 2077389 | 39020.9 |
| ribonuclease d | HMY34_10195 | Q6G329 | Negative | 2077391 - 2078533 | 43257.4 |
| hypothetical protein | HMY34_10200 | Q9HWK6 | Negative | 2078859 - 2080598 | 61386.7 |
| hypothetical protein | HMY34_10205 | Not Available | Negative | 2080610 - 2081179 | 20110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
