Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | HMY34_10060 | Q0VM16 | Negative | 2048182 - 2049069 | 33917.6 |
| duf484 family protein | HMY34_10065 | P55886 | Negative | 2049100 - 2049819 | 26956.4 |
| diaminopimelate epimerase | HMY34_10070 | Q5P2V2 | Negative | 2049816 - 2050655 | 29584.8 |
| sulfurtransferase tusa family protein | HMY34_10075 | D3RPC0 | Positive | 2050782 - 2051012 | 8168.91 |
| 8-amino-7-oxononanoate synthase | HMY34_10080 | Q48CS2 | Positive | 2051066 - 2052238 | 41921.4 |
| hypothetical protein | HMY34_10085 | Not Available | Negative | 2052235 - 2052468 | 8675.66 |
| hypothetical protein | HMY34_10090 | Not Available | Positive | 2052576 - 2054390 | 65960.2 |
| hypothetical protein | HMY34_10095 | Not Available | Negative | 2054387 - 2056696 | 80649.2 |
| hypothetical protein | HMY34_10100 | Not Available | Negative | 2056735 - 2057895 | 40516.4 |
| sdr family oxidoreductase | HMY34_10105 | P21158 | Positive | 2058090 - 2058788 | 24642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
