Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abi family protein | HMY34_10010 | Not Available | Negative | 2037766 - 2038782 | 40038.1 |
| sam-dependent dna methyltransferase | HMY34_10015 | Q60297 | Negative | 2038916 - 2040967 | 77299.5 |
| lipoyl synthase | HMY34_10020 | B8GMV6 | Positive | 2041124 - 2042074 | 35494.9 |
| ydcf family protein | HMY34_10025 | P44292 | Positive | 2042071 - 2042814 | 28234.2 |
| hypothetical protein | HMY34_10030 | Not Available | Negative | 2042811 - 2044229 | 51647.7 |
| atp-binding protein | HMY34_10035 | Not Available | Positive | 2044443 - 2045225 | 29529.3 |
| ankyrin repeat domain-containing protein | HMY34_10040 | Not Available | Positive | 2045226 - 2045768 | 18128.5 |
| hypothetical protein | HMY34_10045 | Not Available | Positive | 2045793 - 2046134 | 12447.8 |
| hypothetical protein | HMY34_10050 | Not Available | Positive | 2046143 - 2046751 | 21672.9 |
| transposase | HMY34_10055 | P54992 | Negative | 2046776 - 2047984 | 45109.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
