Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | HMY34_09960 | A0KR00 | Positive | 2027854 - 2027988 | 5073.36 |
| ribonuclease p protein component | HMY34_09965 | Q1QS97 | Positive | 2027993 - 2028397 | 15050.4 |
| membrane protein insertase yidc | HMY34_09970 | B8GRD1 | Positive | 2028424 - 2030097 | 62005.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | HMY34_09975 | Q31DJ0 | Positive | 2030111 - 2031451 | 48553.3 |
| type i restriction endonuclease subunit r | HMY34_09980 | O05052 | Negative | 2031453 - 2034641 | 121328.0 |
| hypothetical protein | HMY34_09985 | Not Available | Negative | 2034657 - 2035322 | 25291.4 |
| putative toxin-antitoxin system toxin component, pin family | HMY34_09990 | Not Available | Positive | 2035462 - 2035893 | 16219.6 |
| toxin-antitoxin system hicb family antitoxin | HMY34_09995 | Not Available | Positive | 2035890 - 2036126 | 8616.49 |
| upf0175 family protein | HMY34_10000 | Not Available | Negative | 2036162 - 2036413 | 9522.69 |
| restriction endonuclease subunit s | HMY34_10005 | Q58615 | Negative | 2036469 - 2037626 | 42952.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
