Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3368 domain-containing protein | HMY34_09760 | Not Available | Positive | 1987624 - 1988103 | 16898.1 |
| imidazole glycerol phosphate synthase subunit hish | HMY34_09765 | Q3SEU6 | Positive | 1988133 - 1988771 | 23565.2 |
| sel1-like repeat protein | HMY34_09770 | Not Available | Negative | 1988783 - 1989295 | 18235.4 |
| transporter substrate-binding domain-containing protein | HMY34_09775 | Q06758 | Negative | 1989292 - 1990311 | 36995.4 |
| dna-protecting protein dpra | HMY34_09780 | P30852 | Positive | 1990492 - 1991652 | 41348.6 |
| duf494 domain-containing protein | HMY34_09785 | B8GU08 | Positive | 1991652 - 1992125 | 18203.2 |
| polyamine aminopropyltransferase | HMY34_09790 | B8GQ45 | Positive | 1992196 - 1993053 | 31684.7 |
| dna (cytosine-5-)-methyltransferase | HMY34_09795 | P50196 | Positive | 1993300 - 1994568 | 47908.5 |
| dna (cytosine-5-)-methyltransferase | HMY34_09800 | P05101 | Positive | 1994671 - 1996005 | 50477.9 |
| hypothetical protein | HMY34_09805 | Not Available | Positive | 1996070 - 1997395 | 49015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
