Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | HMY34_09660 | Q86CZ2 | Negative | 1968432 - 1969070 | 23044.4 |
| is4 family transposase | HMY34_09665 | Q46731 | Positive | 1969080 - 1970414 | 50946.7 |
| transporter substrate-binding domain-containing protein | HMY34_09670 | P0C0F7 | Negative | 1970384 - 1971910 | 56441.3 |
| atp-binding protein | HMY34_09675 | Not Available | Positive | 1972082 - 1973284 | 44865.5 |
| rlob domain-containing protein | HMY34_09680 | Not Available | Positive | 1973296 - 1973799 | 18777.0 |
| aaa family atpase | HMY34_09685 | Not Available | Negative | 1973847 - 1975772 | 73776.5 |
| lactate utilization protein | HMY34_09690 | Q9JYT7 | Negative | 1975832 - 1976482 | 23879.6 |
| iron-sulfur cluster-binding protein | HMY34_09695 | O07021 | Negative | 1976475 - 1977890 | 51842.4 |
| (fe-s)-binding protein | HMY34_09700 | Q5L300 | Negative | 1977887 - 1978636 | 26990.7 |
| transcriptional regulator lldr | HMY34_09705 | P0ACL7 | Negative | 1978643 - 1979392 | 28175.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
