Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HMY34_09560 | Q5X627 | Negative | 1949482 - 1950204 | 27067.6 |
| abc transporter permease | HMY34_09565 | Q0P886 | Negative | 1950201 - 1950902 | 24803.9 |
| solute-binding protein | HMY34_09570 | Q93KD6 | Negative | 1950909 - 1951784 | 30844.8 |
| restriction endonuclease subunit s | HMY34_09575 | Q58615 | Negative | 1951960 - 1953132 | 43928.3 |
| cell division protein | HMY34_09580 | P55548 | Negative | 1953272 - 1953841 | 21638.8 |
| hypothetical protein | HMY34_09585 | Not Available | Negative | 1953841 - 1954170 | 12172.6 |
| sam-dependent dna methyltransferase | HMY34_09590 | Q47282 | Negative | 1954217 - 1955803 | 58499.7 |
| prevent-host-death family protein | HMY34_09595 | P58322 | Positive | 1955915 - 1956241 | 11846.5 |
| duf3368 domain-containing protein | HMY34_09600 | Not Available | Positive | 1956238 - 1956729 | 17917.0 |
| upf0175 family protein | HMY34_09605 | Not Available | Positive | 1956841 - 1957107 | 9791.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
