Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | HMY34_09510 | Q51423 | Negative | 1937797 - 1938546 | 26927.7 |
| class i sam-dependent dna methyltransferase | HMY34_09515 | O31504 | Positive | 1938702 - 1941425 | 103336.0 |
| endonuclease domain-containing protein | HMY34_09520 | P44075 | Positive | 1941560 - 1941994 | 16568.0 |
| rubredoxin | HMY34_09525 | Q0VTA9 | Negative | 1942037 - 1942201 | 6080.18 |
| is200/is605 family element transposase accessory protein tnpb | HMY34_09530 | P54992 | Positive | 1942439 - 1943671 | 45696.0 |
| hypothetical protein | HMY34_09535 | Not Available | Positive | 1943750 - 1944145 | 14668.3 |
| hypothetical protein | HMY34_09540 | Not Available | Positive | 1944189 - 1945370 | 44949.1 |
| sulfite exporter taue/safe family protein | HMY34_09545 | Not Available | Positive | 1945389 - 1946159 | 27580.0 |
| fumarylacetoacetate hydrolase family protein | HMY34_09550 | O06724 | Positive | 1946156 - 1947034 | 31439.8 |
| bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein mobb/molybdopterin molybdotransferase moea | HMY34_09555 | Q56066 | Negative | 1947026 - 1949485 | 88136.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
