Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | HMY34_09460 | A8AQI1 | Negative | 1929288 - 1929836 | 20811.2 |
| lysm peptidoglycan-binding domain-containing protein | HMY34_09465 | P54335 | Positive | 1929933 - 1931057 | 41009.8 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | HMY34_09470 | Q2RSB4 | Negative | 1931102 - 1932478 | 48714.4 |
| nad(p) transhydrogenase subunit alpha | HMY34_09475 | P51995 | Negative | 1932481 - 1932768 | 10024.7 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | HMY34_09480 | Q2RSB2 | Negative | 1932771 - 1933898 | 38944.3 |
| ompa family protein | HMY34_09485 | Q05146 | Negative | 1934064 - 1934660 | 20230.0 |
| hypothetical protein | HMY34_09490 | Not Available | Negative | 1934934 - 1935269 | 11469.2 |
| nucleoside triphosphate pyrophosphohydrolase | HMY34_09495 | P0AEY4 | Positive | 1935396 - 1936220 | 30717.2 |
| holliday junction branch migration protein ruva | HMY34_09500 | Q4K7D8 | Negative | 1936697 - 1937296 | 21642.3 |
| crossover junction endodeoxyribonuclease ruvc | HMY34_09505 | A5EXG1 | Negative | 1937293 - 1937778 | 17127.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
