Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | HMY34_09410 | Not Available | Negative | 1916218 - 1916865 | 23255.5 |
| potassium transporter | HMY34_09415 | Q87TN7 | Negative | 1917029 - 1918480 | 53144.1 |
| trk system potassium transporter trka | HMY34_09420 | P0A2K0 | Negative | 1918493 - 1919866 | 50404.5 |
| hypothetical protein | HMY34_09425 | Not Available | Negative | 1919873 - 1921024 | 43231.1 |
| dna cytosine methyltransferase | HMY34_09430 | O31073 | Negative | 1921026 - 1922897 | 70564.4 |
| sigma-54-dependent fis family transcriptional regulator | HMY34_09435 | Q04849 | Negative | 1922922 - 1924310 | 52628.2 |
| hamp domain-containing protein | HMY34_09440 | Q04850 | Negative | 1924322 - 1926496 | 81648.4 |
| duf4390 domain-containing protein | HMY34_09445 | Not Available | Negative | 1926481 - 1927059 | 22222.7 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | HMY34_09450 | Q9KVU5 | Negative | 1927056 - 1928369 | 48154.9 |
| glucose-6-phosphate dehydrogenase | HMY34_09455 | Q2SQX2 | Negative | 1928366 - 1929291 | 32805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
