Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_09310 | Not Available | Positive | 1894907 - 1895020 | 3982.84 |
| glucose-6-phosphate dehydrogenase | HMY34_09315 | B7GWH6 | Negative | 1895018 - 1895122 | 3874.92 |
| duf3368 domain-containing protein | HMY34_09320 | Not Available | Negative | 1895234 - 1895725 | 17778.8 |
| prevent-host-death family protein | HMY34_09325 | O29658 | Negative | 1895722 - 1896048 | 11911.3 |
| hypothetical protein | HMY34_09330 | Not Available | Positive | 1896202 - 1897281 | 37248.1 |
| hypothetical protein | HMY34_09335 | Not Available | Positive | 1897303 - 1898403 | 42700.8 |
| aaa family atpase | HMY34_09340 | O78439 | Positive | 1898406 - 1899890 | 55484.9 |
| txe/yoeb family addiction module toxin | HMY34_09345 | Q8FG53 | Negative | 1899956 - 1900225 | 10221.4 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HMY34_09350 | Q83KJ8 | Negative | 1900206 - 1900478 | 10113.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HMY34_09355 | A4XQV8 | Positive | 1900634 - 1901572 | 34097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
