Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | HMY34_09210 | P50466 | Positive | 1878004 - 1878489 | 18605.2 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | HMY34_09215 | Not Available | Positive | 1878491 - 1879240 | 27958.8 |
| lpxtg cell wall anchor domain-containing protein | HMY34_09220 | Q9HZA6 | Positive | 1879243 - 1880319 | 38536.5 |
| ompa family protein | HMY34_09225 | P13794 | Positive | 1880481 - 1881218 | 26729.2 |
| hypothetical protein | HMY34_09230 | Not Available | Positive | 1881224 - 1881877 | 25040.1 |
| hypothetical protein | HMY34_09235 | Not Available | Negative | 1881879 - 1882373 | 18507.2 |
| tatd family hydrolase | HMY34_09240 | P39408 | Negative | 1882370 - 1883155 | 29486.5 |
| metallophosphoesterase | HMY34_09245 | Q8DEI1 | Positive | 1883331 - 1884155 | 31190.2 |
| hypothetical protein | HMY34_09250 | Not Available | Positive | 1884278 - 1884838 | 20142.8 |
| trna dihydrouridine(16) synthase dusc | HMY34_09255 | Q8EFG7 | Positive | 1884843 - 1885781 | 34280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
