Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| czb domain-containing protein | HMY34_09110 | Not Available | Negative | 1862642 - 1863037 | 14729.8 |
| transcriptional repressor | HMY34_09115 | P0AC51 | Negative | 1863116 - 1863553 | 16436.6 |
| hydroxymethylbilane synthase | HMY34_09120 | A7MQJ1 | Positive | 1863888 - 1864817 | 33704.0 |
| uroporphyrinogen-iii synthase | HMY34_09125 | P09126 | Positive | 1864810 - 1865589 | 28382.4 |
| hypothetical protein | HMY34_09130 | P09127 | Positive | 1865586 - 1866929 | 48566.4 |
| heme biosynthesis protein hemy | HMY34_09135 | P0ACB9 | Positive | 1866926 - 1868203 | 47819.3 |
| malate dehydrogenase | HMY34_09140 | E1V8J1 | Negative | 1868216 - 1869433 | 43257.4 |
| m48 family metalloprotease | HMY34_09145 | P66948 | Negative | 1869492 - 1870475 | 35152.7 |
| type b 50s ribosomal protein l31 | HMY34_09150 | Q1GYX9 | Negative | 1870560 - 1870811 | 9416.12 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | HMY34_09155 | Q5QYY0 | Negative | 1870916 - 1871431 | 18757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
