Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | HMY34_09060 | Q58292 | Positive | 1854704 - 1855294 | 22109.8 |
| class 1 fructose-bisphosphatase | HMY34_09065 | A1WZH0 | Negative | 1855387 - 1856397 | 36735.3 |
| sigma-70 family rna polymerase sigma factor | HMY34_09070 | Q06198 | Positive | 1856680 - 1857288 | 23350.0 |
| hypothetical protein | HMY34_09075 | Not Available | Positive | 1857323 - 1858069 | 27770.6 |
| s8 family serine peptidase | HMY34_09080 | P29600 | Positive | 1858075 - 1859301 | 42954.0 |
| hypothetical protein | HMY34_09085 | Not Available | Positive | 1859436 - 1859582 | 5583.92 |
| oxygen-dependent coproporphyrinogen oxidase | HMY34_09090 | A6UX86 | Negative | 1859591 - 1860508 | 34380.3 |
| scp-like extracellular | HMY34_09095 | Q40374 | Negative | 1860567 - 1861130 | 20148.9 |
| mbl fold metallo-hydrolase | HMY34_09100 | P75849 | Negative | 1861146 - 1861775 | 22852.4 |
| sulfite exporter taue/safe family protein | HMY34_09105 | P44070 | Positive | 1861845 - 1862630 | 27138.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
