Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | HMY34_09010 | P45790 | Negative | 1846093 - 1847085 | 35180.0 |
| nad-dependent epimerase | HMY34_09015 | Q04871 | Negative | 1847120 - 1848136 | 37771.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | HMY34_09020 | B8GP39 | Negative | 1848165 - 1849064 | 33161.9 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | HMY34_09025 | Q8DDD7 | Positive | 1849181 - 1849648 | 16467.0 |
| hypothetical protein | HMY34_09030 | Not Available | Positive | 1850114 - 1850848 | 26277.4 |
| hypothetical protein | HMY34_09035 | Not Available | Positive | 1850869 - 1851456 | 22910.2 |
| hypothetical protein | HMY34_09040 | Not Available | Positive | 1851618 - 1852136 | 19839.7 |
| dnaj domain-containing protein | HMY34_09045 | Not Available | Positive | 1852147 - 1853103 | 36874.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | HMY34_09050 | P12045 | Positive | 1853188 - 1854315 | 40914.4 |
| hypothetical protein | HMY34_09055 | Not Available | Positive | 1854327 - 1854704 | 13104.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
