Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | HMY34_08860 | P0AA72 | Positive | 1811659 - 1812537 | 31783.9 |
| glycine oxidase thio | HMY34_08865 | Q88Q83 | Negative | 1812585 - 1813697 | 40801.4 |
| hypothetical protein | HMY34_08870 | Not Available | Negative | 1813777 - 1815378 | 60146.7 |
| hypothetical protein | HMY34_08875 | Not Available | Positive | 1815790 - 1817064 | 45736.0 |
| meta domain-containing protein | HMY34_08880 | Not Available | Positive | 1817108 - 1817638 | 18712.3 |
| tetratricopeptide repeat protein | HMY34_08885 | P9WKP8 | Positive | 1817873 - 1820344 | 91070.0 |
| duf1566 domain-containing protein | HMY34_08890 | Not Available | Negative | 1820377 - 1820904 | 19339.8 |
| duf1566 domain-containing protein | HMY34_08895 | Not Available | Negative | 1820953 - 1821804 | 30498.2 |
| hypothetical protein | HMY34_08900 | Not Available | Negative | 1821788 - 1822291 | 19236.1 |
| hypothetical protein | HMY34_08905 | Not Available | Negative | 1822365 - 1822976 | 21948.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
